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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929757.1_cds_XP_016476992.1_68777
CDS Infomation

[gene=LOC107798499] [db_xref=GeneID:107798499] [protein=long chain base biosynthesis protein 1-like] [protein_id=XP_016476992.1] [location=join(292493..292607,292698..292792,293261..293352,294161..294254,294343..294415,294523..294655,295500..295674,297538..297678,297755..297850,297974..298115,298228..298355,298463..298639)] [gbkey=CDS]
Sequence

ATGGATTCAGCAGTTTCTGTACTGACAAATATGGTGAGAGTTACATCTGATTGGGTGACA
TCAGCCTTTGAGGTTCCATTCGCAAGAGCTGTGATATTTGAGGTTAACATTGGAGGACAT
CTATTTGTGGAAGGTCTTCTCCTGGTGGTCATTGTCTTTCTAATGTCTCAGAAGAGTTAC
AAACCACCTAAAAGACCATTGACAAAGAAGGAAATTGATGAGTTATGTGAAGAATGGGCC
CCAGAACCACTTATCCCTTCCATCACTGATGAGATGAAACATGAACCTCCGGTTTTGGAA
AGTGCTGCAGGGCCTCATACTATAGTTAATGGGAAAGACGTAGTGAACTTCACTTCGGCG
AATTACCTTGGATTATTAGGAAGCAAAGAATTACTAGAGACTTGTACTTCAGCTCTAGAG
AAGTATGGTGTAGGTTCTTGTGGTCCCCGGGGATTCTATGGCACAATTGATGTCCACCTT
GATTGTGAGGCTAGAATAGCGAAGTTTCTGGGAACTCCAGATTCCATACTCTACTCGTAT
GGACTTTCTACAATGTTCAGTGCAATTCCAGCTTTTTGCAAAAAGGGAGATGTTGTTATC
GCGGATGAAGGTGTCCACTGGGGAATCCAGAATGGCCTTCAGCTCTCTAGAAGTACCATC
ATATACTTTAAGCATAACAATATGGAGTCGTTGCGAAGTACTTTGGAGAAAGTAACCCAA
GAAAACAAACAAGCTAAGAAGCTTAGGCGCTATATCGTTGTTGAAGCTGTGTATCAGAAT
TCTGGCAAAGTAGCTCCATTAGATGAAATCATCAAGCTGAAGGAAAAATATCGATTCCGT
GTATTGTTGGATGAGAGCAATTCCATTGGTGTGCTTGGCAGTTCTGGTAGAGGTCTAACT
GAACATTGTAAAGTTCCGGCTGACAAGATAGATATAATAACTGCGGCAATGGGACATGCA
TTGGCCACAGAAGGCGGCTTTTGCACTGGGAATGCTAGAGTCATTGATCACCAGCGCCTC
AGTAGTTCTGGTTATGTCTTCTCTGCTTCACTGCCTCCTTACTTAGCAAGTGCTGCGATT
AAGGCTATTGATATCGTGGAAGAAAAACCTGAACTTCTTGTCAAACTGAGGCAAAATATT
GCTACGTTGACTAAAGGTCTATCGGATATAAAAGGCTTAGATATAGTAAGTGATCCGCTC
TCCCCGATTATATTCCTTACATTAAAGAAGTCCACTGGTTCTTCAAAGGGTGATCTACAA
ATGCTTGAAGATATAGCTGATCATGTCTTGAAGGAAGATTCTGTCTTTATTGTTACTTCA
AAGAGGTCAACTCTTGATAAATGTAAGCTGCCAGTTGGAATTAGATTATTTGTGTCGGCA
GCTCATTCAGAAGCCGATCTGGTGAAAGCCAGTGAATCATTGAAAAGAGCAGCAGAATCG
CTATTGCCAGTTCGCGATTGA

Peptide Sequence

PEP ID

XP_016476992.1
PEP Infomation

PREDICTED: long chain base biosynthesis protein 1-like [Nicotiana tabacum]
Sequence

MDSAVSVLTNMVRVTSDWVTSAFEVPFARAVIFEVNIGGHLFVEGLLLVVIVFLMSQKSY
KPPKRPLTKKEIDELCEEWAPEPLIPSITDEMKHEPPVLESAAGPHTIVNGKDVVNFTSA
NYLGLLGSKELLETCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSY
GLSTMFSAIPAFCKKGDVVIADEGVHWGIQNGLQLSRSTIIYFKHNNMESLRSTLEKVTQ
ENKQAKKLRRYIVVEAVYQNSGKVAPLDEIIKLKEKYRFRVLLDESNSIGVLGSSGRGLT
EHCKVPADKIDIITAAMGHALATEGGFCTGNARVIDHQRLSSSGYVFSASLPPYLASAAI
KAIDIVEEKPELLVKLRQNIATLTKGLSDIKGLDIVSDPLSPIIFLTLKKSTGSSKGDLQ
MLEDIADHVLKEDSVFIVTSKRSTLDKCKLPVGIRLFVSAAHSEADLVKASESLKRAAES
LLPVRD

Transcript Sequence

Gene sequence data has not been registered.